Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.93□□□□□ -0.34
CMC4P56277 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.93□□□□□ -0.34
CMC4P56277 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.93□□□□□ -0.34
CMC4P56277 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CMC4P56277 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.93□□□□□ -0.34
CMC4P56277 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CMC4P56277 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 AL773604.1-201ENST00000617417 272 ntBASIC12.93□□□□□ -0.34
CMC4P56277 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.93□□□□□ -0.34
CMC4P56277 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.93□□□□□ -0.34
CMC4P56277 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.93□□□□□ -0.34
CMC4P56277 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.93□□□□□ -0.34
CMC4P56277 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.93□□□□□ -0.34
CMC4P56277 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.93□□□□□ -0.34
CMC4P56277 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CMC4P56277 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.93□□□□□ -0.34
CMC4P56277 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.93□□□□□ -0.34
CMC4P56277 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 LYSMD4-203ENST00000378904 2122 ntBASIC12.92□□□□□ -0.34
CMC4P56277 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CMC4P56277 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CMC4P56277 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.92□□□□□ -0.34
CMC4P56277 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CMC4P56277 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.92□□□□□ -0.34
CMC4P56277 BX005266.1-201ENST00000473402 457 ntBASIC12.92□□□□□ -0.34
CMC4P56277 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.92□□□□□ -0.34
CMC4P56277 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.92□□□□□ -0.34
CMC4P56277 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.92□□□□□ -0.34
CMC4P56277 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 AC097637.2-201ENST00000624096 1997 ntBASIC12.92□□□□□ -0.34
CMC4P56277 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
CMC4P56277 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CMC4P56277 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.92□□□□□ -0.34
CMC4P56277 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.92□□□□□ -0.34
CMC4P56277 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
CMC4P56277 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CMC4P56277 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.91□□□□□ -0.34
CMC4P56277 SART3-203ENST00000546611 1184 ntBASIC12.91□□□□□ -0.34
CMC4P56277 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.91□□□□□ -0.34
CMC4P56277 AC021087.4-201ENST00000563761 564 ntBASIC12.91□□□□□ -0.34
CMC4P56277 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.91□□□□□ -0.34
CMC4P56277 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.91□□□□□ -0.34
CMC4P56277 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.91□□□□□ -0.34
CMC4P56277 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CMC4P56277 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.91□□□□□ -0.34
CMC4P56277 AC107918.4-202ENST00000641623 219 ntBASIC12.91□□□□□ -0.34
CMC4P56277 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms