Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 ELK2BP-201ENST00000415014 1224 ntBASIC12.72□□□□□ -0.37
APOC4P55056 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.72□□□□□ -0.37
APOC4P55056 AC108751.1-201ENST00000490852 363 ntBASIC12.72□□□□□ -0.37
APOC4P55056 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 UNC93B6-202ENST00000528242 690 ntBASIC12.72□□□□□ -0.37
APOC4P55056 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.72□□□□□ -0.37
APOC4P55056 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.72□□□□□ -0.37
APOC4P55056 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
APOC4P55056 GGTLC5P-201ENST00000617623 998 ntBASIC12.72□□□□□ -0.37
APOC4P55056 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.72□□□□□ -0.37
APOC4P55056 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
APOC4P55056 GPR89P-201ENST00000407924 1495 ntBASIC12.72□□□□□ -0.37
APOC4P55056 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
APOC4P55056 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
APOC4P55056 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.71□□□□□ -0.37
APOC4P55056 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.71□□□□□ -0.37
APOC4P55056 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
APOC4P55056 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.71□□□□□ -0.37
APOC4P55056 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.71□□□□□ -0.37
APOC4P55056 LINC00982-205ENST00000420957 435 ntBASIC12.71□□□□□ -0.37
APOC4P55056 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.71□□□□□ -0.37
APOC4P55056 RPS15P9-201ENST00000494093 319 ntBASIC12.71□□□□□ -0.37
APOC4P55056 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
APOC4P55056 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
APOC4P55056 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
APOC4P55056 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
APOC4P55056 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC4P55056 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC12.71□□□□□ -0.38
APOC4P55056 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC4P55056 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC4P55056 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.71□□□□□ -0.38
APOC4P55056 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOC4P55056 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOC4P55056 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
APOC4P55056 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
APOC4P55056 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.71□□□□□ -0.38
APOC4P55056 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.7□□□□□ -0.38
APOC4P55056 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
APOC4P55056 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.7□□□□□ -0.38
APOC4P55056 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms