Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB4P54760 AC135776.1-201ENST00000319817 2481 ntBASIC19.51■□□□□ 0.71
EPHB4P54760 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
EPHB4P54760 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB4P54760 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB4P54760 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB4P54760 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.51■□□□□ 0.71
EPHB4P54760 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB4P54760 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB4P54760 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.51■□□□□ 0.71
EPHB4P54760 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
EPHB4P54760 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EPHB4P54760 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
EPHB4P54760 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.5■□□□□ 0.71
EPHB4P54760 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHB4P54760 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.5■□□□□ 0.71
EPHB4P54760 AC007967.3-201ENST00000434308 558 ntBASIC19.5■□□□□ 0.71
EPHB4P54760 BCRP1-201ENST00000444246 691 ntBASIC19.5■□□□□ 0.71
EPHB4P54760 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHB4P54760 CEND1P1-201ENST00000451006 455 ntBASIC19.5■□□□□ 0.71
EPHB4P54760 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHB4P54760 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
EPHB4P54760 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.5■□□□□ 0.71
EPHB4P54760 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
EPHB4P54760 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
EPHB4P54760 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EPHB4P54760 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.5■□□□□ 0.71
EPHB4P54760 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.5■□□□□ 0.71
EPHB4P54760 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
EPHB4P54760 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 GPR89P-201ENST00000407924 1495 ntBASIC19.49■□□□□ 0.71
EPHB4P54760 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHB4P54760 AC099398.1-201ENST00000567919 2776 ntBASIC19.49■□□□□ 0.71
EPHB4P54760 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHB4P54760 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
EPHB4P54760 AL139400.1-201ENST00000366220 510 ntBASIC19.49■□□□□ 0.71
EPHB4P54760 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.49■□□□□ 0.71
EPHB4P54760 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
EPHB4P54760 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHB4P54760 AL031432.2-201ENST00000566714 459 ntBASIC19.49■□□□□ 0.71
EPHB4P54760 AL928711.1-201ENST00000570165 459 ntBASIC19.49■□□□□ 0.71
EPHB4P54760 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHB4P54760 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.49■□□□□ 0.71
EPHB4P54760 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 HTR7P1-202ENST00000624664 4411 ntBASIC19.49■□□□□ 0.71
EPHB4P54760 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
EPHB4P54760 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
EPHB4P54760 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.49■□□□□ 0.71
EPHB4P54760 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.49■□□□□ 0.71
EPHB4P54760 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EPHB4P54760 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
EPHB4P54760 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.48■□□□□ 0.71
EPHB4P54760 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.48■□□□□ 0.71
EPHB4P54760 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.48■□□□□ 0.71
EPHB4P54760 CRYGEP-201ENST00000412192 528 ntBASIC19.48■□□□□ 0.71
EPHB4P54760 MKNK2P1-201ENST00000437526 628 ntBASIC19.48■□□□□ 0.71
EPHB4P54760 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.48■□□□□ 0.71
EPHB4P54760 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB4P54760 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.48■□□□□ 0.71
EPHB4P54760 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.48■□□□□ 0.71
EPHB4P54760 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB4P54760 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EPHB4P54760 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.48■□□□□ 0.71
EPHB4P54760 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
EPHB4P54760 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
EPHB4P54760 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHB4P54760 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EPHB4P54760 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHB4P54760 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
EPHB4P54760 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.47■□□□□ 0.71
EPHB4P54760 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.47■□□□□ 0.71
EPHB4P54760 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms