Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 AC011495.1-201ENST00000498085 584 ntBASIC17.24■□□□□ 0.35
NUBP1P53384 CSNK1A1P3-201ENST00000504105 330 ntBASIC17.24■□□□□ 0.35
NUBP1P53384 AC092658.1-201ENST00000505836 891 ntBASIC17.24■□□□□ 0.35
NUBP1P53384 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.24■□□□□ 0.35
NUBP1P53384 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.24■□□□□ 0.35
NUBP1P53384 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.24■□□□□ 0.35
NUBP1P53384 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.24■□□□□ 0.35
NUBP1P53384 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC17.24■□□□□ 0.35
NUBP1P53384 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.24■□□□□ 0.35
NUBP1P53384 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC17.24■□□□□ 0.35
NUBP1P53384 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NUBP1P53384 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NUBP1P53384 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUBP1P53384 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.24■□□□□ 0.35
NUBP1P53384 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 AL133338.1-201ENST00000565695 1517 ntBASIC17.23■□□□□ 0.35
NUBP1P53384 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 AC093677.2-201ENST00000600169 1863 ntBASIC17.23■□□□□ 0.35
NUBP1P53384 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 DUXAP7-201ENST00000431038 689 ntBASIC17.23■□□□□ 0.35
NUBP1P53384 MTND1P26-201ENST00000440488 538 ntBASIC17.23■□□□□ 0.35
NUBP1P53384 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.23■□□□□ 0.35
NUBP1P53384 RNU6-751P-201ENST00000516382 101 ntBASIC17.23■□□□□ 0.35
NUBP1P53384 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC17.23■□□□□ 0.35
NUBP1P53384 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.23■□□□□ 0.35
NUBP1P53384 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.23■□□□□ 0.35
NUBP1P53384 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NUBP1P53384 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NUBP1P53384 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NUBP1P53384 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NUBP1P53384 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.22■□□□□ 0.35
NUBP1P53384 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUBP1P53384 BX276092.7-203ENST00000637198 1536 ntBASIC17.22■□□□□ 0.35
NUBP1P53384 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NUBP1P53384 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NUBP1P53384 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUBP1P53384 AC002558.1-201ENST00000488906 803 ntBASIC17.22■□□□□ 0.35
NUBP1P53384 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.22■□□□□ 0.35
NUBP1P53384 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC17.22■□□□□ 0.35
NUBP1P53384 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NUBP1P53384 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.22■□□□□ 0.35
NUBP1P53384 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.22■□□□□ 0.35
NUBP1P53384 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.22■□□□□ 0.35
NUBP1P53384 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUBP1P53384 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUBP1P53384 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUBP1P53384 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NUBP1P53384 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
NUBP1P53384 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NUBP1P53384 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.21■□□□□ 0.35
NUBP1P53384 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NUBP1P53384 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NUBP1P53384 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.21■□□□□ 0.35
NUBP1P53384 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.21■□□□□ 0.35
NUBP1P53384 WBP1LP6-201ENST00000438434 424 ntBASIC17.21■□□□□ 0.35
NUBP1P53384 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
NUBP1P53384 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
NUBP1P53384 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.21■□□□□ 0.35
NUBP1P53384 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC17.21■□□□□ 0.35
NUBP1P53384 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NUBP1P53384 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC17.21■□□□□ 0.35
NUBP1P53384 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NUBP1P53384 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.21■□□□□ 0.35
NUBP1P53384 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.21■□□□□ 0.35
NUBP1P53384 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.21■□□□□ 0.35
NUBP1P53384 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.21■□□□□ 0.35
NUBP1P53384 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms