Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-5P52952 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.78□□□□□ -0.04
NKX2-5P52952 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
NKX2-5P52952 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX2-5P52952 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.77□□□□□ -0.04
NKX2-5P52952 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.77□□□□□ -0.04
NKX2-5P52952 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 AL161772.1-201ENST00000610494 4412 ntBASIC14.77□□□□□ -0.04
NKX2-5P52952 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 KRT8P9-201ENST00000558927 1449 ntBASIC14.77□□□□□ -0.04
NKX2-5P52952 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.77□□□□□ -0.04
NKX2-5P52952 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NKX2-5P52952 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.77□□□□□ -0.04
NKX2-5P52952 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NKX2-5P52952 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.77□□□□□ -0.04
NKX2-5P52952 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
NKX2-5P52952 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NKX2-5P52952 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NKX2-5P52952 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.77□□□□□ -0.05
NKX2-5P52952 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.77□□□□□ -0.05
NKX2-5P52952 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-5P52952 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-5P52952 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-5P52952 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.77□□□□□ -0.05
NKX2-5P52952 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-5P52952 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-5P52952 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 LINC02012-201ENST00000608206 1725 ntBASIC14.77□□□□□ -0.05
NKX2-5P52952 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 CICP20-201ENST00000443330 2801 ntBASIC14.77□□□□□ -0.05
NKX2-5P52952 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-5P52952 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NKX2-5P52952 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NKX2-5P52952 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.77□□□□□ -0.05
NKX2-5P52952 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
NKX2-5P52952 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NKX2-5P52952 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-5P52952 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-5P52952 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NKX2-5P52952 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-5P52952 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-5P52952 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.76□□□□□ -0.05
NKX2-5P52952 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.76□□□□□ -0.05
NKX2-5P52952 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 AC099791.1-201ENST00000416440 715 ntBASIC14.76□□□□□ -0.05
NKX2-5P52952 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NKX2-5P52952 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-5P52952 AC100791.3-201ENST00000617619 330 ntBASIC14.76□□□□□ -0.05
NKX2-5P52952 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-5P52952 LINC01451-201ENST00000623792 534 ntBASIC14.76□□□□□ -0.05
NKX2-5P52952 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
NKX2-5P52952 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-5P52952 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.76□□□□□ -0.05
NKX2-5P52952 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-5P52952 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NKX2-5P52952 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
NKX2-5P52952 RCC2P3-201ENST00000418112 1537 ntBASIC14.76□□□□□ -0.05
NKX2-5P52952 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.76□□□□□ -0.05
NKX2-5P52952 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NKX2-5P52952 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms