Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
GTF2A1P52655 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
GTF2A1P52655 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.06■□□□□ 0.32
GTF2A1P52655 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GTF2A1P52655 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GTF2A1P52655 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
GTF2A1P52655 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
GTF2A1P52655 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GTF2A1P52655 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2A1P52655 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.05■□□□□ 0.32
GTF2A1P52655 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.05■□□□□ 0.32
GTF2A1P52655 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.05■□□□□ 0.32
GTF2A1P52655 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
GTF2A1P52655 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2A1P52655 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2A1P52655 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2A1P52655 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GTF2A1P52655 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.05■□□□□ 0.32
GTF2A1P52655 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GTF2A1P52655 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.05■□□□□ 0.32
GTF2A1P52655 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
GTF2A1P52655 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.04■□□□□ 0.32
GTF2A1P52655 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.04■□□□□ 0.32
GTF2A1P52655 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GTF2A1P52655 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
GTF2A1P52655 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
GTF2A1P52655 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.04■□□□□ 0.32
GTF2A1P52655 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.04■□□□□ 0.32
GTF2A1P52655 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.04■□□□□ 0.32
GTF2A1P52655 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.04■□□□□ 0.32
GTF2A1P52655 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.04■□□□□ 0.32
GTF2A1P52655 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GTF2A1P52655 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.04■□□□□ 0.32
GTF2A1P52655 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GTF2A1P52655 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GTF2A1P52655 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GTF2A1P52655 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GTF2A1P52655 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms