Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
BRCA2P51587 AC004233.3-201ENST00000607794 1269 ntBASIC19.19■□□□□ 0.66
BRCA2P51587 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCA2P51587 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 LINC00896-202ENST00000609602 2128 ntBASIC19.18■□□□□ 0.66
BRCA2P51587 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 AL135999.2-201ENST00000622438 1686 ntBASIC19.18■□□□□ 0.66
BRCA2P51587 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 MIR346-201ENST00000362234 95 ntBASIC19.18■□□□□ 0.66
BRCA2P51587 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCA2P51587 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.18■□□□□ 0.66
BRCA2P51587 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.18■□□□□ 0.66
BRCA2P51587 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BRCA2P51587 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.18■□□□□ 0.66
BRCA2P51587 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.18■□□□□ 0.66
BRCA2P51587 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.18■□□□□ 0.66
BRCA2P51587 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.18■□□□□ 0.66
BRCA2P51587 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCA2P51587 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCA2P51587 SNX29P1-201ENST00000548357 1007 ntBASIC19.18■□□□□ 0.66
BRCA2P51587 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.18■□□□□ 0.66
BRCA2P51587 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
BRCA2P51587 AC129492.6-201ENST00000611383 1305 ntBASIC19.18■□□□□ 0.66
BRCA2P51587 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRCA2P51587 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCA2P51587 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
BRCA2P51587 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCA2P51587 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BRCA2P51587 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.17■□□□□ 0.66
BRCA2P51587 FAM86MP-201ENST00000340703 885 ntBASIC19.17■□□□□ 0.66
BRCA2P51587 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.17■□□□□ 0.66
BRCA2P51587 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.17■□□□□ 0.66
BRCA2P51587 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRCA2P51587 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.17■□□□□ 0.66
BRCA2P51587 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCA2P51587 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
BRCA2P51587 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.17■□□□□ 0.66
BRCA2P51587 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.17■□□□□ 0.66
BRCA2P51587 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BRCA2P51587 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.17■□□□□ 0.66
BRCA2P51587 AC092552.1-201ENST00000547243 906 ntBASIC19.17■□□□□ 0.66
BRCA2P51587 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRCA2P51587 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BRCA2P51587 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
BRCA2P51587 AC007541.1-201ENST00000570282 1469 ntBASIC19.17■□□□□ 0.66
BRCA2P51587 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRCA2P51587 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.17■□□□□ 0.66
BRCA2P51587 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRCA2P51587 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.16■□□□□ 0.66
BRCA2P51587 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.16■□□□□ 0.66
BRCA2P51587 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BRCA2P51587 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRCA2P51587 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCA2P51587 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BRCA2P51587 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCA2P51587 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCA2P51587 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.16■□□□□ 0.66
BRCA2P51587 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BRCA2P51587 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCA2P51587 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BRCA2P51587 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCA2P51587 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
BRCA2P51587 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BRCA2P51587 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
BRCA2P51587 AC087163.2-201ENST00000457299 853 ntBASIC19.16■□□□□ 0.66
BRCA2P51587 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.16■□□□□ 0.66
BRCA2P51587 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
BRCA2P51587 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRCA2P51587 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BRCA2P51587 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.16■□□□□ 0.66
BRCA2P51587 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCA2P51587 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRCA2P51587 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRCA2P51587 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.15■□□□□ 0.66
BRCA2P51587 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
BRCA2P51587 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.15■□□□□ 0.66
BRCA2P51587 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.15■□□□□ 0.66
BRCA2P51587 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCA2P51587 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCA2P51587 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
BRCA2P51587 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.15■□□□□ 0.66
BRCA2P51587 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
BRCA2P51587 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRCA2P51587 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRCA2P51587 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.15■□□□□ 0.66
BRCA2P51587 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.15■□□□□ 0.66
BRCA2P51587 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.15■□□□□ 0.66
BRCA2P51587 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms