Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2AP49459 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2AP49459 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
UBE2AP49459 AC099398.1-201ENST00000567919 2776 ntBASIC11.05□□□□□ -0.64
UBE2AP49459 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
UBE2AP49459 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 AC100803.2-201ENST00000562459 1963 ntBASIC11.05□□□□□ -0.64
UBE2AP49459 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 OR2I1P-209ENST00000641730 5365 ntBASIC11.05□□□□□ -0.64
UBE2AP49459 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2AP49459 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
UBE2AP49459 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 SPDYE15P-201ENST00000424157 909 ntBASIC11.05□□□□□ -0.64
UBE2AP49459 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2AP49459 TSPY5P-201ENST00000426936 936 ntBASIC11.05□□□□□ -0.64
UBE2AP49459 AC117947.1-201ENST00000427448 529 ntBASIC11.05□□□□□ -0.64
UBE2AP49459 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
UBE2AP49459 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.05□□□□□ -0.64
UBE2AP49459 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.05□□□□□ -0.64
UBE2AP49459 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
UBE2AP49459 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
UBE2AP49459 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.05□□□□□ -0.64
UBE2AP49459 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.05□□□□□ -0.64
UBE2AP49459 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.05□□□□□ -0.64
UBE2AP49459 AC097493.4-201ENST00000641197 219 ntBASIC11.05□□□□□ -0.64
UBE2AP49459 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.05□□□□□ -0.64
UBE2AP49459 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.05□□□□□ -0.64
UBE2AP49459 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
UBE2AP49459 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
UBE2AP49459 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
UBE2AP49459 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2AP49459 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 AC006116.8-202ENST00000587620 1550 ntBASIC11.04□□□□□ -0.64
UBE2AP49459 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2AP49459 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2AP49459 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2AP49459 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2AP49459 AC211429.1-201ENST00000415277 523 ntBASIC11.04□□□□□ -0.64
UBE2AP49459 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
UBE2AP49459 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
UBE2AP49459 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2AP49459 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2AP49459 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2AP49459 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2AP49459 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.04□□□□□ -0.64
UBE2AP49459 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.04□□□□□ -0.64
UBE2AP49459 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2AP49459 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2AP49459 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.04□□□□□ -0.64
UBE2AP49459 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2AP49459 AC004263.2-201ENST00000617183 678 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms