Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC6A12P48065 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
SLC6A12P48065 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SLC6A12P48065 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC6A12P48065 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC6A12P48065 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A12P48065 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A12P48065 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SLC6A12P48065 PRYP5-201ENST00000451909 266 ntBASIC16.72■□□□□ 0.27
SLC6A12P48065 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.72■□□□□ 0.27
SLC6A12P48065 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A12P48065 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A12P48065 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A12P48065 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A12P48065 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC6A12P48065 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A12P48065 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A12P48065 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC6A12P48065 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A12P48065 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC6A12P48065 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC6A12P48065 GPR89P-201ENST00000407924 1495 ntBASIC16.72■□□□□ 0.27
SLC6A12P48065 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
SLC6A12P48065 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A12P48065 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SLC6A12P48065 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A12P48065 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A12P48065 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 FRMD8P1-201ENST00000440433 1524 ntBASIC16.71■□□□□ 0.27
SLC6A12P48065 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A12P48065 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC6A12P48065 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A12P48065 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC6A12P48065 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.71■□□□□ 0.27
SLC6A12P48065 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A12P48065 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC6A12P48065 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A12P48065 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A12P48065 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC6A12P48065 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A12P48065 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC6A12P48065 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 AC097637.2-201ENST00000624096 1997 ntBASIC16.71■□□□□ 0.27
SLC6A12P48065 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A12P48065 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC6A12P48065 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC6A12P48065 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SLC6A12P48065 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SLC6A12P48065 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SLC6A12P48065 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC6A12P48065 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC6A12P48065 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC6A12P48065 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A12P48065 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC6A12P48065 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC6A12P48065 LINC00982-205ENST00000420957 435 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms