Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ATRXP46100 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.71■□□□□ 0.11
ATRXP46100 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.71■□□□□ 0.11
ATRXP46100 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.71■□□□□ 0.11
ATRXP46100 AL355994.2-201ENST00000447882 704 ntBASIC15.71■□□□□ 0.11
ATRXP46100 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.71■□□□□ 0.11
ATRXP46100 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ATRXP46100 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.71■□□□□ 0.11
ATRXP46100 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.71■□□□□ 0.11
ATRXP46100 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.71■□□□□ 0.11
ATRXP46100 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.71■□□□□ 0.11
ATRXP46100 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ATRXP46100 AC009336.1-201ENST00000608941 1553 ntBASIC15.71■□□□□ 0.11
ATRXP46100 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.71■□□□□ 0.11
ATRXP46100 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATRXP46100 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.71■□□□□ 0.11
ATRXP46100 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATRXP46100 NUS1P3-201ENST00000423502 862 ntBASIC15.71■□□□□ 0.1
ATRXP46100 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATRXP46100 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.71■□□□□ 0.1
ATRXP46100 AL583810.1-201ENST00000553344 1045 ntBASIC15.71■□□□□ 0.1
ATRXP46100 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
ATRXP46100 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.71■□□□□ 0.1
ATRXP46100 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ATRXP46100 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
ATRXP46100 AL391825.1-201ENST00000457671 1364 ntBASIC15.71■□□□□ 0.1
ATRXP46100 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
ATRXP46100 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 AC092978.1-202ENST00000637590 1327 ntBASIC15.7■□□□□ 0.1
ATRXP46100 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 AC241585.1-201ENST00000433527 519 ntBASIC15.7■□□□□ 0.1
ATRXP46100 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.7■□□□□ 0.1
ATRXP46100 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.7■□□□□ 0.1
ATRXP46100 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.7■□□□□ 0.1
ATRXP46100 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.7■□□□□ 0.1
ATRXP46100 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.7■□□□□ 0.1
ATRXP46100 STK25P1-201ENST00000585406 838 ntBASIC15.7■□□□□ 0.1
ATRXP46100 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.7■□□□□ 0.1
ATRXP46100 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
ATRXP46100 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ATRXP46100 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATRXP46100 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.7■□□□□ 0.1
ATRXP46100 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ATRXP46100 RN7SL589P-201ENST00000481268 310 ntBASIC15.7■□□□□ 0.1
ATRXP46100 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
ATRXP46100 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.7■□□□□ 0.1
ATRXP46100 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATRXP46100 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 TUBB1P2-201ENST00000422712 1306 ntBASIC15.69■□□□□ 0.1
ATRXP46100 TUBB1P1-201ENST00000503144 1300 ntBASIC15.69■□□□□ 0.1
ATRXP46100 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.69■□□□□ 0.1
ATRXP46100 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ATRXP46100 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 AC234644.1-201ENST00000406065 370 ntBASIC15.69■□□□□ 0.1
ATRXP46100 RPS2P36-201ENST00000456516 831 ntBASIC15.69■□□□□ 0.1
ATRXP46100 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.69■□□□□ 0.1
ATRXP46100 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.69■□□□□ 0.1
ATRXP46100 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ATRXP46100 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ATRXP46100 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.69■□□□□ 0.1
ATRXP46100 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATRXP46100 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
ATRXP46100 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms