Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.04□□□□□ -0.16
RPL35P42766 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RPL35P42766 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RPL35P42766 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.04□□□□□ -0.16
RPL35P42766 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RPL35P42766 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.04□□□□□ -0.16
RPL35P42766 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RPL35P42766 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RPL35P42766 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 AC107918.4-201ENST00000641966 3141 ntBASIC14.03□□□□□ -0.16
RPL35P42766 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RPL35P42766 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.03□□□□□ -0.16
RPL35P42766 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.03□□□□□ -0.16
RPL35P42766 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.03□□□□□ -0.16
RPL35P42766 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.03□□□□□ -0.16
RPL35P42766 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 GMCL1P1-201ENST00000463439 1581 ntBASIC14.03□□□□□ -0.16
RPL35P42766 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RPL35P42766 AC092068.3-201ENST00000587894 2016 ntBASIC14.03□□□□□ -0.16
RPL35P42766 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
RPL35P42766 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RPL35P42766 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RPL35P42766 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RPL35P42766 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RPL35P42766 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RPL35P42766 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.02□□□□□ -0.16
RPL35P42766 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 PHGDH-209ENST00000641074 1780 ntBASIC14.02□□□□□ -0.16
RPL35P42766 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.02□□□□□ -0.16
RPL35P42766 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RPL35P42766 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RPL35P42766 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RPL35P42766 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RPL35P42766 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.02□□□□□ -0.17
RPL35P42766 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPL35P42766 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPL35P42766 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPL35P42766 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPL35P42766 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RPL35P42766 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms