Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AF186996.4-201ENST00000467186 377 ntBASIC17.26■□□□□ 0.35
HMGCLP35914 AP002469.2-201ENST00000531724 424 ntBASIC17.26■□□□□ 0.35
HMGCLP35914 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
HMGCLP35914 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGCLP35914 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCLP35914 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGCLP35914 AC107918.4-202ENST00000641623 219 ntBASIC17.26■□□□□ 0.35
HMGCLP35914 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HMGCLP35914 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCLP35914 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
HMGCLP35914 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCLP35914 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.26■□□□□ 0.35
HMGCLP35914 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCLP35914 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCLP35914 EGFEM1P-202ENST00000431685 1563 ntBASIC17.25■□□□□ 0.35
HMGCLP35914 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HMGCLP35914 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HMGCLP35914 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 LAGE3P1-201ENST00000425356 484 ntBASIC17.25■□□□□ 0.35
HMGCLP35914 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMGCLP35914 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMGCLP35914 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCLP35914 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.25■□□□□ 0.35
HMGCLP35914 AL353135.1-201ENST00000606729 504 ntBASIC17.25■□□□□ 0.35
HMGCLP35914 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.25■□□□□ 0.35
HMGCLP35914 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.25■□□□□ 0.35
HMGCLP35914 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMGCLP35914 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HMGCLP35914 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 LINC02012-201ENST00000608206 1725 ntBASIC17.24■□□□□ 0.35
HMGCLP35914 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMGCLP35914 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCLP35914 AP001094.4-201ENST00000579008 2176 ntBASIC17.24■□□□□ 0.35
HMGCLP35914 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMGCLP35914 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCLP35914 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCLP35914 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.24■□□□□ 0.35
HMGCLP35914 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCLP35914 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCLP35914 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCLP35914 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCLP35914 AL139424.1-201ENST00000607572 797 ntBASIC17.24■□□□□ 0.35
HMGCLP35914 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 AC004706.3-202ENST00000621574 984 ntBASIC17.24■□□□□ 0.35
HMGCLP35914 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HMGCLP35914 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGCLP35914 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLP35914 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
HMGCLP35914 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HMGCLP35914 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCLP35914 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLP35914 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HMGCLP35914 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGCLP35914 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGCLP35914 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGCLP35914 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGCLP35914 RPS2P1-201ENST00000434010 821 ntBASIC17.23■□□□□ 0.35
HMGCLP35914 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.23■□□□□ 0.35
HMGCLP35914 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGCLP35914 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms