Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT2P35908 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT2P35908 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 PKD1P1-201ENST00000458669 6805 ntBASIC19.89■□□□□ 0.77
KRT2P35908 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT2P35908 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT2P35908 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT2P35908 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT2P35908 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT2P35908 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT2P35908 LINC01711-201ENST00000598340 967 ntBASIC19.89■□□□□ 0.77
KRT2P35908 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.89■□□□□ 0.77
KRT2P35908 REXO1L6P-202ENST00000619970 1078 ntBASIC19.89■□□□□ 0.77
KRT2P35908 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 AL355877.3-201ENST00000622820 899 ntBASIC19.89■□□□□ 0.77
KRT2P35908 AC080080.1-201ENST00000625121 2420 ntBASIC19.89■□□□□ 0.77
KRT2P35908 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT2P35908 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
KRT2P35908 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT2P35908 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT2P35908 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KRT2P35908 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT2P35908 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 LINC02012-201ENST00000608206 1725 ntBASIC19.88■□□□□ 0.77
KRT2P35908 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
KRT2P35908 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KRT2P35908 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
KRT2P35908 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 AKR1C7P-201ENST00000305623 895 ntBASIC19.88■□□□□ 0.77
KRT2P35908 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
KRT2P35908 BX005266.1-201ENST00000473402 457 ntBASIC19.88■□□□□ 0.77
KRT2P35908 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT2P35908 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 AC008608.2-201ENST00000606089 416 ntBASIC19.88■□□□□ 0.77
KRT2P35908 IFNL4P1-201ENST00000607083 540 ntBASIC19.88■□□□□ 0.77
KRT2P35908 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
KRT2P35908 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
KRT2P35908 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT2P35908 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 AC004817.3-201ENST00000602957 2129 ntBASIC19.88■□□□□ 0.77
KRT2P35908 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KRT2P35908 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT2P35908 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT2P35908 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT2P35908 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.87■□□□□ 0.77
KRT2P35908 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.87■□□□□ 0.77
KRT2P35908 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.87■□□□□ 0.77
KRT2P35908 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT2P35908 AL139288.1-201ENST00000623748 933 ntBASIC19.87■□□□□ 0.77
KRT2P35908 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT2P35908 AC097637.2-201ENST00000624096 1997 ntBASIC19.86■□□□□ 0.77
KRT2P35908 AL356309.3-201ENST00000624132 1934 ntBASIC19.86■□□□□ 0.77
KRT2P35908 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.86■□□□□ 0.77
KRT2P35908 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT2P35908 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KRT2P35908 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KRT2P35908 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT2P35908 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms