Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RFC1P35251 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RFC1P35251 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC1P35251 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.31■□□□□ 0.52
RFC1P35251 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.31■□□□□ 0.52
RFC1P35251 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.31■□□□□ 0.52
RFC1P35251 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RFC1P35251 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
RFC1P35251 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.31■□□□□ 0.52
RFC1P35251 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFC1P35251 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RFC1P35251 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RFC1P35251 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.3■□□□□ 0.52
RFC1P35251 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RFC1P35251 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.3■□□□□ 0.52
RFC1P35251 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.3■□□□□ 0.52
RFC1P35251 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
RFC1P35251 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RFC1P35251 NUS1P2-201ENST00000417358 873 ntBASIC18.3■□□□□ 0.52
RFC1P35251 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.3■□□□□ 0.52
RFC1P35251 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 AC138894.3-201ENST00000603787 634 ntBASIC18.3■□□□□ 0.52
RFC1P35251 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFC1P35251 PMPCAP1-201ENST00000508114 1576 ntBASIC18.3■□□□□ 0.52
RFC1P35251 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RFC1P35251 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RFC1P35251 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 SLC25A1P3-201ENST00000395415 828 ntBASIC18.29■□□□□ 0.52
RFC1P35251 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
RFC1P35251 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.29■□□□□ 0.52
RFC1P35251 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 HCG4P8-203ENST00000443049 980 ntBASIC18.29■□□□□ 0.52
RFC1P35251 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFC1P35251 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.29■□□□□ 0.52
RFC1P35251 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 AC073592.5-201ENST00000624854 528 ntBASIC18.29■□□□□ 0.52
RFC1P35251 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.29■□□□□ 0.52
RFC1P35251 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFC1P35251 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
RFC1P35251 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms