Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXC8P31273 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC8P31273 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HOXC8P31273 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC8P31273 AL592309.1-201ENST00000443127 649 ntBASIC18.76■□□□□ 0.59
HOXC8P31273 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXC8P31273 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXC8P31273 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HOXC8P31273 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 AC011467.4-201ENST00000594891 528 ntBASIC18.76■□□□□ 0.59
HOXC8P31273 AL390955.2-201ENST00000603032 514 ntBASIC18.76■□□□□ 0.59
HOXC8P31273 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC8P31273 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXC8P31273 AL353732.1-201ENST00000569618 1459 ntBASIC18.76■□□□□ 0.59
HOXC8P31273 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXC8P31273 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC8P31273 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC8P31273 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 AC012569.1-201ENST00000591191 1524 ntBASIC18.75■□□□□ 0.59
HOXC8P31273 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
HOXC8P31273 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HOXC8P31273 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 AC092474.2-201ENST00000424288 719 ntBASIC18.75■□□□□ 0.59
HOXC8P31273 SPCS2P4-201ENST00000436160 681 ntBASIC18.75■□□□□ 0.59
HOXC8P31273 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.75■□□□□ 0.59
HOXC8P31273 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.75■□□□□ 0.59
HOXC8P31273 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.75■□□□□ 0.59
HOXC8P31273 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HOXC8P31273 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.75■□□□□ 0.59
HOXC8P31273 AC092364.2-202ENST00000597012 1073 ntBASIC18.75■□□□□ 0.59
HOXC8P31273 AL161645.1-201ENST00000622716 1255 ntBASIC18.75■□□□□ 0.59
HOXC8P31273 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HOXC8P31273 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HOXC8P31273 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HOXC8P31273 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
HOXC8P31273 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HOXC8P31273 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.74■□□□□ 0.59
HOXC8P31273 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HOXC8P31273 SLC22A20-204ENST00000530038 1673 ntBASIC18.74■□□□□ 0.59
HOXC8P31273 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.74■□□□□ 0.59
HOXC8P31273 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
HOXC8P31273 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.74■□□□□ 0.59
HOXC8P31273 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.74■□□□□ 0.59
HOXC8P31273 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.74■□□□□ 0.59
HOXC8P31273 AC051619.7-201ENST00000568314 623 ntBASIC18.74■□□□□ 0.59
HOXC8P31273 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.74■□□□□ 0.59
HOXC8P31273 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 AP001059.3-201ENST00000619053 235 ntBASIC18.74■□□□□ 0.59
HOXC8P31273 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.74■□□□□ 0.59
HOXC8P31273 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.74■□□□□ 0.59
HOXC8P31273 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HOXC8P31273 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HOXC8P31273 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HOXC8P31273 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HOXC8P31273 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HOXC8P31273 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.73■□□□□ 0.59
HOXC8P31273 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HOXC8P31273 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HOXC8P31273 HCG4-201ENST00000418983 998 ntBASIC18.73■□□□□ 0.59
HOXC8P31273 AC005237.2-201ENST00000434368 219 ntBASIC18.73■□□□□ 0.59
HOXC8P31273 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.73■□□□□ 0.59
HOXC8P31273 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.73■□□□□ 0.59
HOXC8P31273 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.73■□□□□ 0.59
HOXC8P31273 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms