Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CAPN3P20807 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.73■□□□□ 0.27
CAPN3P20807 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.73■□□□□ 0.27
CAPN3P20807 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.73■□□□□ 0.27
CAPN3P20807 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.73■□□□□ 0.27
CAPN3P20807 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 DOC2GP-204ENST00000639052 2548 ntBASIC16.73■□□□□ 0.27
CAPN3P20807 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
CAPN3P20807 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CAPN3P20807 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CAPN3P20807 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN3P20807 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.72■□□□□ 0.27
CAPN3P20807 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN3P20807 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.72■□□□□ 0.27
CAPN3P20807 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 AL023973.1-201ENST00000624619 620 ntBASIC16.72■□□□□ 0.27
CAPN3P20807 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN3P20807 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 AC093525.9-201ENST00000624961 1746 ntBASIC16.72■□□□□ 0.27
CAPN3P20807 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CAPN3P20807 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CAPN3P20807 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN3P20807 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN3P20807 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN3P20807 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CAPN3P20807 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms