Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.17■□□□□ 0.66
SMPD1P17405 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.17■□□□□ 0.66
SMPD1P17405 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.17■□□□□ 0.66
SMPD1P17405 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.17■□□□□ 0.66
SMPD1P17405 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.17■□□□□ 0.66
SMPD1P17405 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.17■□□□□ 0.66
SMPD1P17405 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.17■□□□□ 0.66
SMPD1P17405 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.17■□□□□ 0.66
SMPD1P17405 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.17■□□□□ 0.66
SMPD1P17405 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SMPD1P17405 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.17■□□□□ 0.66
SMPD1P17405 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SMPD1P17405 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.17■□□□□ 0.66
SMPD1P17405 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMPD1P17405 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.16■□□□□ 0.66
SMPD1P17405 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
SMPD1P17405 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SMPD1P17405 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.16■□□□□ 0.66
SMPD1P17405 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.16■□□□□ 0.66
SMPD1P17405 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 TFAMP1-201ENST00000412727 736 ntBASIC19.16■□□□□ 0.66
SMPD1P17405 AC005237.2-201ENST00000434368 219 ntBASIC19.16■□□□□ 0.66
SMPD1P17405 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 AL592309.1-201ENST00000443127 649 ntBASIC19.16■□□□□ 0.66
SMPD1P17405 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.16■□□□□ 0.66
SMPD1P17405 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.16■□□□□ 0.66
SMPD1P17405 AC079140.1-201ENST00000508039 487 ntBASIC19.16■□□□□ 0.66
SMPD1P17405 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.16■□□□□ 0.66
SMPD1P17405 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.16■□□□□ 0.66
SMPD1P17405 AC243562.1-201ENST00000560672 389 ntBASIC19.16■□□□□ 0.66
SMPD1P17405 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.16■□□□□ 0.66
SMPD1P17405 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.16■□□□□ 0.66
SMPD1P17405 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.16■□□□□ 0.66
SMPD1P17405 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.16■□□□□ 0.66
SMPD1P17405 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMPD1P17405 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.16■□□□□ 0.66
SMPD1P17405 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.15■□□□□ 0.66
SMPD1P17405 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.15■□□□□ 0.66
SMPD1P17405 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.15■□□□□ 0.66
SMPD1P17405 HMGA1P7-201ENST00000406908 502 ntBASIC19.15■□□□□ 0.66
SMPD1P17405 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.15■□□□□ 0.66
SMPD1P17405 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.15■□□□□ 0.66
SMPD1P17405 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.15■□□□□ 0.66
SMPD1P17405 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.15■□□□□ 0.66
SMPD1P17405 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.15■□□□□ 0.66
SMPD1P17405 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.15■□□□□ 0.66
SMPD1P17405 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMPD1P17405 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
SMPD1P17405 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SMPD1P17405 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.14■□□□□ 0.66
SMPD1P17405 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMPD1P17405 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMPD1P17405 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms