Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
CFTRP13569 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC29.29■■■□□ 2.28
CFTRP13569 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC29.29■■■□□ 2.28
CFTRP13569 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 PGF-202ENST00000405431 666 ntTSL 5 BASIC29.29■■■□□ 2.28
CFTRP13569 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC29.29■■■□□ 2.28
CFTRP13569 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC29.29■■■□□ 2.28
CFTRP13569 MNT-208ENST00000575394 606 ntTSL 4 BASIC29.29■■■□□ 2.28
CFTRP13569 AC004790.1-201ENST00000612686 536 ntBASIC29.29■■■□□ 2.28
CFTRP13569 TEX28P1-201ENST00000613479 1221 ntBASIC29.29■■■□□ 2.28
CFTRP13569 TEX28P2-201ENST00000617764 1221 ntBASIC29.29■■■□□ 2.28
CFTRP13569 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 HLA-DQB1-201ENST00000374943 1656 ntBASIC29.29■■■□□ 2.28
CFTRP13569 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC29.29■■■□□ 2.28
CFTRP13569 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
CFTRP13569 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC29.29■■■□□ 2.28
CFTRP13569 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC29.29■■■□□ 2.28
CFTRP13569 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC29.29■■■□□ 2.28
CFTRP13569 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC29.29■■■□□ 2.28
CFTRP13569 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CFTRP13569 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC29.29■■■□□ 2.28
CFTRP13569 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC29.29■■■□□ 2.28
CFTRP13569 SSH2-210ENST00000582084 560 ntTSL 3 BASIC29.29■■■□□ 2.28
CFTRP13569 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC29.29■■■□□ 2.28
CFTRP13569 LINC01451-201ENST00000623792 534 ntBASIC29.29■■■□□ 2.28
CFTRP13569 LINC00895-201ENST00000629028 1637 ntBASIC29.29■■■□□ 2.28
CFTRP13569 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC29.28■■■□□ 2.28
CFTRP13569 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC29.28■■■□□ 2.28
CFTRP13569 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC29.28■■■□□ 2.28
CFTRP13569 WIZP1-201ENST00000531444 2299 ntBASIC29.28■■■□□ 2.28
CFTRP13569 LINC00304-203ENST00000565008 1864 ntBASIC29.28■■■□□ 2.28
CFTRP13569 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
CFTRP13569 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC29.28■■■□□ 2.28
CFTRP13569 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
CFTRP13569 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC29.28■■■□□ 2.28
CFTRP13569 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC29.28■■■□□ 2.28
CFTRP13569 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC29.28■■■□□ 2.28
CFTRP13569 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CFTRP13569 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC29.27■■■□□ 2.28
CFTRP13569 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC29.27■■■□□ 2.28
CFTRP13569 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC29.27■■■□□ 2.28
CFTRP13569 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
CFTRP13569 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 AP3S2-216ENST00000617003 1561 ntBASIC29.27■■■□□ 2.28
CFTRP13569 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC29.27■■■□□ 2.28
CFTRP13569 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC29.27■■■□□ 2.28
CFTRP13569 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC29.27■■■□□ 2.28
CFTRP13569 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC29.27■■■□□ 2.28
CFTRP13569 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC29.27■■■□□ 2.28
CFTRP13569 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC29.27■■■□□ 2.28
CFTRP13569 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC29.27■■■□□ 2.28
CFTRP13569 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC29.27■■■□□ 2.28
CFTRP13569 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
CFTRP13569 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC29.27■■■□□ 2.28
CFTRP13569 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC29.27■■■□□ 2.28
CFTRP13569 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CFTRP13569 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CFTRP13569 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
CFTRP13569 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CFTRP13569 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC29.26■■■□□ 2.27
CFTRP13569 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC29.26■■■□□ 2.27
CFTRP13569 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CFTRP13569 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC29.26■■■□□ 2.27
CFTRP13569 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC29.26■■■□□ 2.27
CFTRP13569 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC29.26■■■□□ 2.27
CFTRP13569 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC29.26■■■□□ 2.27
CFTRP13569 GIMAP3P-201ENST00000495150 836 ntBASIC29.26■■■□□ 2.27
CFTRP13569 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC29.26■■■□□ 2.27
CFTRP13569 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CFTRP13569 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CFTRP13569 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CFTRP13569 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC29.26■■■□□ 2.27
CFTRP13569 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CFTRP13569 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
CFTRP13569 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CFTRP13569 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC29.25■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms