Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.24■□□□□ 0.51
RARAP10276 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.24■□□□□ 0.51
RARAP10276 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RARAP10276 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.24■□□□□ 0.51
RARAP10276 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
RARAP10276 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.23■□□□□ 0.51
RARAP10276 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.23■□□□□ 0.51
RARAP10276 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.23■□□□□ 0.51
RARAP10276 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 SLC25A1P3-201ENST00000395415 828 ntBASIC18.23■□□□□ 0.51
RARAP10276 AC103564.2-201ENST00000432853 1299 ntBASIC18.23■□□□□ 0.51
RARAP10276 LINC00265-3P-201ENST00000447588 903 ntBASIC18.23■□□□□ 0.51
RARAP10276 IGHV3-52-201ENST00000519770 353 ntBASIC18.23■□□□□ 0.51
RARAP10276 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.23■□□□□ 0.51
RARAP10276 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.23■□□□□ 0.51
RARAP10276 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RARAP10276 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.23■□□□□ 0.51
RARAP10276 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RARAP10276 AC011467.2-201ENST00000598425 242 ntBASIC18.23■□□□□ 0.51
RARAP10276 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.23■□□□□ 0.51
RARAP10276 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.23■□□□□ 0.51
RARAP10276 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 UBALD1-205ENST00000590891 2641 ntBASIC18.23■□□□□ 0.51
RARAP10276 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RARAP10276 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.23■□□□□ 0.51
RARAP10276 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 KRT8P10-201ENST00000450021 1447 ntBASIC18.23■□□□□ 0.51
RARAP10276 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RARAP10276 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.23■□□□□ 0.51
RARAP10276 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.22■□□□□ 0.51
RARAP10276 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RARAP10276 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 TP73-AS1-210ENST00000637775 1455 ntBASIC18.22■□□□□ 0.51
RARAP10276 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.22■□□□□ 0.51
RARAP10276 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RARAP10276 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RARAP10276 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.22■□□□□ 0.51
RARAP10276 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 IGHV3-47-201ENST00000425060 335 ntBASIC18.22■□□□□ 0.51
RARAP10276 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.22■□□□□ 0.51
RARAP10276 KRT17P6-201ENST00000453795 1220 ntBASIC18.22■□□□□ 0.51
RARAP10276 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.22■□□□□ 0.51
RARAP10276 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.22■□□□□ 0.51
RARAP10276 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 AC069148.1-201ENST00000608741 768 ntBASIC18.22■□□□□ 0.51
RARAP10276 AC091076.1-201ENST00000610741 619 ntBASIC18.22■□□□□ 0.51
RARAP10276 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.22■□□□□ 0.51
RARAP10276 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RARAP10276 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RARAP10276 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.21■□□□□ 0.51
RARAP10276 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RARAP10276 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
RARAP10276 MYCLP1-201ENST00000372451 1075 ntBASIC18.21■□□□□ 0.51
RARAP10276 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.21■□□□□ 0.51
RARAP10276 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.21■□□□□ 0.51
RARAP10276 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.21■□□□□ 0.51
RARAP10276 BNIP3P18-201ENST00000593976 575 ntBASIC18.21■□□□□ 0.51
RARAP10276 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms