Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RBP1P09455 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBP1P09455 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBP1P09455 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.12■□□□□ 0.33
RBP1P09455 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.12■□□□□ 0.33
RBP1P09455 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RBP1P09455 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.12■□□□□ 0.33
RBP1P09455 AC124947.2-201ENST00000547118 1133 ntBASIC17.12■□□□□ 0.33
RBP1P09455 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
RBP1P09455 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBP1P09455 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RBP1P09455 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBP1P09455 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RBP1P09455 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RBP1P09455 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.12■□□□□ 0.33
RBP1P09455 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.12■□□□□ 0.33
RBP1P09455 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RBP1P09455 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RBP1P09455 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.11■□□□□ 0.33
RBP1P09455 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RBP1P09455 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.11■□□□□ 0.33
RBP1P09455 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.11■□□□□ 0.33
RBP1P09455 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.11■□□□□ 0.33
RBP1P09455 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
RBP1P09455 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.11■□□□□ 0.33
RBP1P09455 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.11■□□□□ 0.33
RBP1P09455 AC011498.5-201ENST00000592027 486 ntBASIC17.11■□□□□ 0.33
RBP1P09455 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.11■□□□□ 0.33
RBP1P09455 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.11■□□□□ 0.33
RBP1P09455 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RBP1P09455 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 AC005915.1-201ENST00000624912 2018 ntBASIC17.11■□□□□ 0.33
RBP1P09455 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.11■□□□□ 0.33
RBP1P09455 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
RBP1P09455 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RBP1P09455 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBP1P09455 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RBP1P09455 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 AC092053.1-201ENST00000605787 1936 ntBASIC17.1■□□□□ 0.33
RBP1P09455 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RBP1P09455 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.1■□□□□ 0.33
RBP1P09455 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.1■□□□□ 0.33
RBP1P09455 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RBP1P09455 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.1■□□□□ 0.33
RBP1P09455 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RBP1P09455 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 STK25P1-201ENST00000585406 838 ntBASIC17.1■□□□□ 0.33
RBP1P09455 AC005336.2-201ENST00000593183 939 ntBASIC17.1■□□□□ 0.33
RBP1P09455 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 KRT8P10-201ENST00000450021 1447 ntBASIC17.1■□□□□ 0.33
RBP1P09455 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.1■□□□□ 0.33
RBP1P09455 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.1■□□□□ 0.33
RBP1P09455 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.1■□□□□ 0.33
RBP1P09455 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.1■□□□□ 0.33
RBP1P09455 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.1■□□□□ 0.33
RBP1P09455 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBP1P09455 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBP1P09455 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.09■□□□□ 0.33
RBP1P09455 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBP1P09455 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms