Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPN1P07384 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPN1P07384 KRT8P10-201ENST00000450021 1447 ntBASIC17.13■□□□□ 0.33
CAPN1P07384 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN1P07384 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPN1P07384 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN1P07384 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN1P07384 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CAPN1P07384 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CAPN1P07384 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 AC079781.3-201ENST00000449110 356 ntBASIC17.12■□□□□ 0.33
CAPN1P07384 AC009078.2-202ENST00000463353 338 ntBASIC17.12■□□□□ 0.33
CAPN1P07384 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.12■□□□□ 0.33
CAPN1P07384 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPN1P07384 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.12■□□□□ 0.33
CAPN1P07384 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
CAPN1P07384 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPN1P07384 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CAPN1P07384 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CAPN1P07384 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CAPN1P07384 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPN1P07384 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN1P07384 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN1P07384 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN1P07384 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 AD000864.1-201ENST00000624076 2295 ntBASIC17.11■□□□□ 0.33
CAPN1P07384 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CAPN1P07384 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 VENTXP7-201ENST00000475503 772 ntBASIC17.11■□□□□ 0.33
CAPN1P07384 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 AC011840.4-201ENST00000578471 627 ntBASIC17.11■□□□□ 0.33
CAPN1P07384 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CAPN1P07384 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN1P07384 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN1P07384 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CAPN1P07384 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CAPN1P07384 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN1P07384 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CAPN1P07384 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CAPN1P07384 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN1P07384 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CAPN1P07384 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN1P07384 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms