Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RB1P06400 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.23■□□□□ 0.51
RB1P06400 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.23■□□□□ 0.51
RB1P06400 AC026150.2-201ENST00000564693 1156 ntBASIC18.23■□□□□ 0.51
RB1P06400 AL158211.3-201ENST00000607385 239 ntBASIC18.23■□□□□ 0.51
RB1P06400 AC008761.3-201ENST00000624803 892 ntBASIC18.23■□□□□ 0.51
RB1P06400 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.23■□□□□ 0.51
RB1P06400 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.23■□□□□ 0.51
RB1P06400 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RB1P06400 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.22■□□□□ 0.51
RB1P06400 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RB1P06400 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RB1P06400 FO538757.1-201ENST00000623083 1397 ntBASIC18.22■□□□□ 0.51
RB1P06400 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 GK-202ENST00000378941 458 ntTSL 3 BASIC18.22■□□□□ 0.51
RB1P06400 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.22■□□□□ 0.51
RB1P06400 GAPDHP21-201ENST00000450301 1010 ntBASIC18.22■□□□□ 0.51
RB1P06400 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.22■□□□□ 0.51
RB1P06400 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.22■□□□□ 0.51
RB1P06400 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.22■□□□□ 0.51
RB1P06400 AC005412.3-201ENST00000580309 715 ntBASIC18.22■□□□□ 0.51
RB1P06400 LINC02560-201ENST00000596379 459 ntBASIC18.22■□□□□ 0.51
RB1P06400 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.22■□□□□ 0.51
RB1P06400 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.22■□□□□ 0.51
RB1P06400 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.22■□□□□ 0.51
RB1P06400 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.22■□□□□ 0.51
RB1P06400 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.22■□□□□ 0.51
RB1P06400 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.22■□□□□ 0.51
RB1P06400 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RB1P06400 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RB1P06400 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RB1P06400 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RB1P06400 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RB1P06400 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RB1P06400 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.21■□□□□ 0.51
RB1P06400 MIR661-201ENST00000384842 89 ntBASIC18.21■□□□□ 0.51
RB1P06400 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
RB1P06400 HMGA1P7-201ENST00000406908 502 ntBASIC18.21■□□□□ 0.51
RB1P06400 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.21■□□□□ 0.51
RB1P06400 AL512638.1-201ENST00000457493 794 ntBASIC18.21■□□□□ 0.51
RB1P06400 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.21■□□□□ 0.51
RB1P06400 SLC25A39P2-201ENST00000537614 270 ntBASIC18.21■□□□□ 0.51
RB1P06400 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.21■□□□□ 0.51
RB1P06400 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.21■□□□□ 0.51
RB1P06400 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.21■□□□□ 0.51
RB1P06400 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.21■□□□□ 0.51
RB1P06400 AL139327.4-201ENST00000612362 153 ntBASIC18.21■□□□□ 0.51
RB1P06400 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.21■□□□□ 0.51
RB1P06400 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.21■□□□□ 0.51
RB1P06400 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RB1P06400 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RB1P06400 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.21■□□□□ 0.51
RB1P06400 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RB1P06400 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.2■□□□□ 0.5
RB1P06400 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RB1P06400 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RB1P06400 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RB1P06400 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RB1P06400 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.2■□□□□ 0.5
RB1P06400 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms