Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
TCRAP04437 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.24□□□□□ -0.29
TCRAP04437 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 AP000523.1-201ENST00000398242 1049 ntBASIC13.24□□□□□ -0.29
TCRAP04437 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 MIR1238-201ENST00000408483 83 ntBASIC13.24□□□□□ -0.29
TCRAP04437 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.24□□□□□ -0.29
TCRAP04437 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.24□□□□□ -0.29
TCRAP04437 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 LINC02199-201ENST00000506655 2702 ntBASIC13.24□□□□□ -0.29
TCRAP04437 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TCRAP04437 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
TCRAP04437 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TCRAP04437 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRAP04437 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.23□□□□□ -0.29
TCRAP04437 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TCRAP04437 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TCRAP04437 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.23□□□□□ -0.29
TCRAP04437 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRAP04437 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TCRAP04437 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TCRAP04437 TSPY12P-201ENST00000421279 868 ntBASIC13.23□□□□□ -0.29
TCRAP04437 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.23□□□□□ -0.29
TCRAP04437 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
TCRAP04437 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.23□□□□□ -0.29
TCRAP04437 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.23□□□□□ -0.29
TCRAP04437 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.23□□□□□ -0.29
TCRAP04437 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.23□□□□□ -0.29
TCRAP04437 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TCRAP04437 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TCRAP04437 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
TCRAP04437 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRAP04437 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRAP04437 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TCRAP04437 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
TCRAP04437 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRAP04437 PCDHA1-201ENST00000378133 2726 ntBASIC13.22□□□□□ -0.29
TCRAP04437 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.22□□□□□ -0.29
TCRAP04437 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 AC079328.2-201ENST00000561241 3354 ntBASIC13.22□□□□□ -0.29
TCRAP04437 AC092171.3-201ENST00000610122 2651 ntBASIC13.22□□□□□ -0.29
TCRAP04437 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRAP04437 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.22□□□□□ -0.29
TCRAP04437 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
TCRAP04437 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.22□□□□□ -0.29
TCRAP04437 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TCRAP04437 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TCRAP04437 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TCRAP04437 AC124947.2-201ENST00000547118 1133 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms