Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MT-ND3P03897 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-ND3P03897 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-ND3P03897 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND3P03897 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-ND3P03897 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MT-ND3P03897 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND3P03897 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MT-ND3P03897 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND3P03897 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 LYSMD4-203ENST00000378904 2122 ntBASIC17.71■□□□□ 0.43
MT-ND3P03897 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND3P03897 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MT-ND3P03897 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
MT-ND3P03897 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-ND3P03897 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND3P03897 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND3P03897 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.71■□□□□ 0.43
MT-ND3P03897 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.71■□□□□ 0.43
MT-ND3P03897 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MT-ND3P03897 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-ND3P03897 PCDHA14-201ENST00000506751 2298 ntBASIC17.71■□□□□ 0.43
MT-ND3P03897 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND3P03897 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND3P03897 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
MT-ND3P03897 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-ND3P03897 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND3P03897 AC018695.7-201ENST00000624587 2492 ntBASIC17.71■□□□□ 0.42
MT-ND3P03897 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.71■□□□□ 0.42
MT-ND3P03897 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
MT-ND3P03897 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MT-ND3P03897 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
MT-ND3P03897 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 AC105020.1-201ENST00000435356 2205 ntBASIC17.7■□□□□ 0.42
MT-ND3P03897 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-ND3P03897 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-ND3P03897 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-ND3P03897 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.7■□□□□ 0.42
MT-ND3P03897 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.7■□□□□ 0.42
MT-ND3P03897 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.7■□□□□ 0.42
MT-ND3P03897 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MT-ND3P03897 AL121672.3-201ENST00000608644 468 ntBASIC17.7■□□□□ 0.42
MT-ND3P03897 AL157888.1-201ENST00000631930 593 ntBASIC17.7■□□□□ 0.42
MT-ND3P03897 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MT-ND3P03897 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.7■□□□□ 0.42
MT-ND3P03897 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-ND3P03897 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MT-ND3P03897 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
MT-ND3P03897 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.69■□□□□ 0.42
MT-ND3P03897 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MT-ND3P03897 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MT-ND3P03897 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms