Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DQA2P01906 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 GUSBP12-201ENST00000513727 720 ntBASIC15.62■□□□□ 0.09
HLA-DQA2P01906 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 RNF126P1-202ENST00000569893 925 ntBASIC15.62■□□□□ 0.09
HLA-DQA2P01906 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HLA-DQA2P01906 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 AC016396.2-201ENST00000562575 1417 ntBASIC15.61■□□□□ 0.09
HLA-DQA2P01906 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 AL671277.2-201ENST00000458060 996 ntBASIC15.61■□□□□ 0.09
HLA-DQA2P01906 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 HYMAI.1-201ENST00000620949 238 ntBASIC15.61■□□□□ 0.09
HLA-DQA2P01906 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DQA2P01906 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms