Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
MBD3O95983 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.92■□□□□ 0.78
MBD3O95983 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.92■□□□□ 0.78
MBD3O95983 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 MYCLP1-201ENST00000372451 1075 ntBASIC19.92■□□□□ 0.78
MBD3O95983 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.92■□□□□ 0.78
MBD3O95983 MIR4651-201ENST00000582622 73 ntBASIC19.92■□□□□ 0.78
MBD3O95983 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MBD3O95983 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MBD3O95983 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.92■□□□□ 0.78
MBD3O95983 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MBD3O95983 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MBD3O95983 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
MBD3O95983 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 AC096633.1-201ENST00000422446 749 ntBASIC19.91■□□□□ 0.78
MBD3O95983 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.91■□□□□ 0.78
MBD3O95983 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 AL662844.4-201ENST00000606367 2838 ntBASIC19.91■□□□□ 0.78
MBD3O95983 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.91■□□□□ 0.78
MBD3O95983 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
MBD3O95983 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
MBD3O95983 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MBD3O95983 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.91■□□□□ 0.78
MBD3O95983 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MBD3O95983 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MBD3O95983 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.9■□□□□ 0.78
MBD3O95983 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MBD3O95983 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MBD3O95983 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.9■□□□□ 0.78
MBD3O95983 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
MBD3O95983 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.9■□□□□ 0.78
MBD3O95983 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MBD3O95983 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.9■□□□□ 0.78
MBD3O95983 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.9■□□□□ 0.78
MBD3O95983 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD3O95983 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD3O95983 AP000525.1-201ENST00000608286 694 ntBASIC19.9■□□□□ 0.78
MBD3O95983 AC004263.2-201ENST00000617183 678 ntBASIC19.9■□□□□ 0.78
MBD3O95983 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MBD3O95983 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.9■□□□□ 0.78
MBD3O95983 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MBD3O95983 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
MBD3O95983 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MBD3O95983 AL596257.1-201ENST00000641463 2694 ntBASIC19.89■□□□□ 0.78
MBD3O95983 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MBD3O95983 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
MBD3O95983 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
MBD3O95983 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
MBD3O95983 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3O95983 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.89■□□□□ 0.77
MBD3O95983 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms