Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
LTN1O94822 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.73■■□□□ 1.23
LTN1O94822 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.73■■□□□ 1.23
LTN1O94822 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.73■■□□□ 1.23
LTN1O94822 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 RAB34-224ENST00000636513 888 ntTSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LTN1O94822 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.73■■□□□ 1.23
LTN1O94822 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.73■■□□□ 1.23
LTN1O94822 AC008677.1-201ENST00000519230 1561 ntBASIC22.72■■□□□ 1.23
LTN1O94822 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC22.72■■□□□ 1.23
LTN1O94822 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
LTN1O94822 PPP6R2P1-201ENST00000450880 1275 ntBASIC22.72■■□□□ 1.23
LTN1O94822 AC069120.2-201ENST00000524091 540 ntBASIC22.72■■□□□ 1.23
LTN1O94822 GATD1-206ENST00000526325 756 ntTSL 5 BASIC22.72■■□□□ 1.23
LTN1O94822 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
LTN1O94822 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LTN1O94822 UXT-AS1-201ENST00000590504 1525 ntBASIC22.72■■□□□ 1.23
LTN1O94822 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
LTN1O94822 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.72■■□□□ 1.23
LTN1O94822 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
LTN1O94822 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC22.71■■□□□ 1.23
LTN1O94822 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 AC002472.2-201ENST00000442739 958 ntBASIC22.71■■□□□ 1.23
LTN1O94822 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
LTN1O94822 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC22.71■■□□□ 1.23
LTN1O94822 AC109635.5-201ENST00000533593 962 ntBASIC22.71■■□□□ 1.23
LTN1O94822 SLC25A39P2-201ENST00000537614 270 ntBASIC22.71■■□□□ 1.23
LTN1O94822 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 HARS-204ENST00000438307 1789 ntTSL 2 BASIC22.71■■□□□ 1.23
LTN1O94822 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC22.71■■□□□ 1.23
LTN1O94822 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.71■■□□□ 1.23
LTN1O94822 AC087289.5-201ENST00000586076 3175 ntBASIC22.71■■□□□ 1.23
LTN1O94822 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
LTN1O94822 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
LTN1O94822 TUBB3P1-201ENST00000405796 1332 ntBASIC22.71■■□□□ 1.23
LTN1O94822 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC22.71■■□□□ 1.23
LTN1O94822 AC026150.2-201ENST00000564693 1156 ntBASIC22.71■■□□□ 1.23
LTN1O94822 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC22.71■■□□□ 1.23
LTN1O94822 SSH2-211ENST00000590153 570 ntTSL 4 BASIC22.71■■□□□ 1.23
LTN1O94822 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
LTN1O94822 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LTN1O94822 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
LTN1O94822 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
LTN1O94822 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
LTN1O94822 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
LTN1O94822 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LTN1O94822 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
LTN1O94822 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LTN1O94822 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LTN1O94822 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
LTN1O94822 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LTN1O94822 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LTN1O94822 GSAP-205ENST00000430584 600 ntTSL 5 BASIC22.7■■□□□ 1.22
LTN1O94822 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
LTN1O94822 AL512356.2-201ENST00000546955 174 ntBASIC22.7■■□□□ 1.22
LTN1O94822 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.7■■□□□ 1.22
LTN1O94822 AL158211.3-201ENST00000607385 239 ntBASIC22.7■■□□□ 1.22
LTN1O94822 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LTN1O94822 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
LTN1O94822 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
LTN1O94822 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC22.7■■□□□ 1.22
LTN1O94822 FOXO1B-201ENST00000504678 1527 ntBASIC22.69■■□□□ 1.22
LTN1O94822 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC22.69■■□□□ 1.22
LTN1O94822 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC22.69■■□□□ 1.22
LTN1O94822 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
LTN1O94822 FO538757.1-201ENST00000623083 1397 ntBASIC22.69■■□□□ 1.22
LTN1O94822 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
LTN1O94822 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
LTN1O94822 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC22.69■■□□□ 1.22
LTN1O94822 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC22.69■■□□□ 1.22
LTN1O94822 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC22.69■■□□□ 1.22
LTN1O94822 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 AC239800.4-201ENST00000603712 296 ntBASIC22.69■■□□□ 1.22
LTN1O94822 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LTN1O94822 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.69■■□□□ 1.22
LTN1O94822 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
LTN1O94822 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms