Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DCXO43602 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.34■□□□□ 0.53
DCXO43602 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DCXO43602 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DCXO43602 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
DCXO43602 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.33■□□□□ 0.53
DCXO43602 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DCXO43602 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DCXO43602 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DCXO43602 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DCXO43602 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DCXO43602 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DCXO43602 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DCXO43602 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
DCXO43602 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.33■□□□□ 0.52
DCXO43602 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.33■□□□□ 0.52
DCXO43602 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.33■□□□□ 0.52
DCXO43602 INGX-202ENST00000489074 768 ntBASIC18.33■□□□□ 0.52
DCXO43602 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.33■□□□□ 0.52
DCXO43602 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.33■□□□□ 0.52
DCXO43602 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.33■□□□□ 0.52
DCXO43602 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.33■□□□□ 0.52
DCXO43602 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.33■□□□□ 0.52
DCXO43602 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.33■□□□□ 0.52
DCXO43602 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.33■□□□□ 0.52
DCXO43602 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.33■□□□□ 0.52
DCXO43602 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
DCXO43602 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
DCXO43602 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
DCXO43602 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DCXO43602 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.32■□□□□ 0.52
DCXO43602 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DCXO43602 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DCXO43602 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DCXO43602 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.32■□□□□ 0.52
DCXO43602 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.32■□□□□ 0.52
DCXO43602 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.32■□□□□ 0.52
DCXO43602 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.32■□□□□ 0.52
DCXO43602 AC093214.1-201ENST00000511688 1107 ntBASIC18.32■□□□□ 0.52
DCXO43602 KRT18P41-201ENST00000518924 1277 ntBASIC18.32■□□□□ 0.52
DCXO43602 AC109322.1-201ENST00000524499 1264 ntBASIC18.32■□□□□ 0.52
DCXO43602 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DCXO43602 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.32■□□□□ 0.52
DCXO43602 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.32■□□□□ 0.52
DCXO43602 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.32■□□□□ 0.52
DCXO43602 AL589182.2-201ENST00000619332 1049 ntBASIC18.32■□□□□ 0.52
DCXO43602 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.32■□□□□ 0.52
DCXO43602 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
DCXO43602 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.32■□□□□ 0.52
DCXO43602 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.32■□□□□ 0.52
DCXO43602 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
DCXO43602 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCXO43602 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.31■□□□□ 0.52
DCXO43602 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.31■□□□□ 0.52
DCXO43602 AC004817.3-201ENST00000602957 2129 ntBASIC18.31■□□□□ 0.52
DCXO43602 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 PMPCAP1-201ENST00000508114 1576 ntBASIC18.31■□□□□ 0.52
DCXO43602 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.31■□□□□ 0.52
DCXO43602 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DCXO43602 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.31■□□□□ 0.52
DCXO43602 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
DCXO43602 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCXO43602 AC004461.1-201ENST00000412461 403 ntBASIC18.31■□□□□ 0.52
DCXO43602 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.31■□□□□ 0.52
DCXO43602 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.31■□□□□ 0.52
DCXO43602 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.31■□□□□ 0.52
DCXO43602 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.31■□□□□ 0.52
DCXO43602 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms