Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.52■■□□□ 1.04
SRGAP3O43295 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.52■■□□□ 1.04
SRGAP3O43295 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
SRGAP3O43295 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRGAP3O43295 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.52■■□□□ 1.04
SRGAP3O43295 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SRGAP3O43295 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.52■■□□□ 1.04
SRGAP3O43295 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SRGAP3O43295 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.52■■□□□ 1.04
SRGAP3O43295 AC090340.1-201ENST00000620778 4980 ntBASIC21.52■■□□□ 1.04
SRGAP3O43295 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
SRGAP3O43295 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SRGAP3O43295 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SRGAP3O43295 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SRGAP3O43295 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
SRGAP3O43295 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SRGAP3O43295 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.51■■□□□ 1.03
SRGAP3O43295 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SRGAP3O43295 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.51■■□□□ 1.03
SRGAP3O43295 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.51■■□□□ 1.03
SRGAP3O43295 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.51■■□□□ 1.03
SRGAP3O43295 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.51■■□□□ 1.03
SRGAP3O43295 SLC25A1P3-201ENST00000395415 828 ntBASIC21.51■■□□□ 1.03
SRGAP3O43295 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.51■■□□□ 1.03
SRGAP3O43295 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.51■■□□□ 1.03
SRGAP3O43295 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SRGAP3O43295 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.51■■□□□ 1.03
SRGAP3O43295 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.51■■□□□ 1.03
SRGAP3O43295 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SRGAP3O43295 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 AC116353.5-201ENST00000638148 1699 ntBASIC21.5■■□□□ 1.03
SRGAP3O43295 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SRGAP3O43295 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.5■■□□□ 1.03
SRGAP3O43295 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.5■■□□□ 1.03
SRGAP3O43295 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.5■■□□□ 1.03
SRGAP3O43295 AL356488.2-201ENST00000602755 427 ntBASIC21.5■■□□□ 1.03
SRGAP3O43295 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.5■■□□□ 1.03
SRGAP3O43295 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.5■■□□□ 1.03
SRGAP3O43295 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
SRGAP3O43295 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
SRGAP3O43295 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 AL590787.1-201ENST00000568856 1315 ntBASIC21.5■■□□□ 1.03
SRGAP3O43295 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.5■■□□□ 1.03
SRGAP3O43295 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SRGAP3O43295 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.49■■□□□ 1.03
SRGAP3O43295 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.49■■□□□ 1.03
SRGAP3O43295 AC093525.9-201ENST00000624961 1746 ntBASIC21.49■■□□□ 1.03
SRGAP3O43295 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SRGAP3O43295 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.49■■□□□ 1.03
SRGAP3O43295 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.49■■□□□ 1.03
SRGAP3O43295 AC136632.2-201ENST00000512891 861 ntBASIC21.49■■□□□ 1.03
SRGAP3O43295 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.49■■□□□ 1.03
SRGAP3O43295 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.49■■□□□ 1.03
SRGAP3O43295 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.49■■□□□ 1.03
SRGAP3O43295 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.49■■□□□ 1.03
SRGAP3O43295 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.49■■□□□ 1.03
SRGAP3O43295 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.49■■□□□ 1.03
SRGAP3O43295 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SRGAP3O43295 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms