Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.29■□□□□ 0.52
SOX1O00570 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SOX1O00570 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX1O00570 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX1O00570 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.29■□□□□ 0.52
SOX1O00570 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.29■□□□□ 0.52
SOX1O00570 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.29■□□□□ 0.52
SOX1O00570 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SOX1O00570 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.29■□□□□ 0.52
SOX1O00570 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SOX1O00570 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
SOX1O00570 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX1O00570 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SOX1O00570 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.28■□□□□ 0.52
SOX1O00570 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX1O00570 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.28■□□□□ 0.52
SOX1O00570 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX1O00570 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.28■□□□□ 0.52
SOX1O00570 IGHV3-52-201ENST00000519770 353 ntBASIC18.28■□□□□ 0.52
SOX1O00570 AC135586.1-201ENST00000539323 574 ntBASIC18.28■□□□□ 0.52
SOX1O00570 AL583810.1-201ENST00000553344 1045 ntBASIC18.28■□□□□ 0.52
SOX1O00570 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 TEX28P1-201ENST00000613479 1221 ntBASIC18.28■□□□□ 0.52
SOX1O00570 AC007967.4-201ENST00000614700 386 ntBASIC18.28■□□□□ 0.52
SOX1O00570 TEX28P2-201ENST00000617764 1221 ntBASIC18.28■□□□□ 0.52
SOX1O00570 AL139099.5-201ENST00000635274 300 ntBASIC18.28■□□□□ 0.52
SOX1O00570 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SOX1O00570 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.28■□□□□ 0.52
SOX1O00570 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SOX1O00570 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SOX1O00570 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SOX1O00570 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX1O00570 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.27■□□□□ 0.52
SOX1O00570 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX1O00570 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX1O00570 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX1O00570 GMCL1P1-201ENST00000463439 1581 ntBASIC18.27■□□□□ 0.52
SOX1O00570 WASH6P-202ENST00000359512 1437 ntBASIC18.27■□□□□ 0.52
SOX1O00570 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX1O00570 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SOX1O00570 AC073130.3-201ENST00000624389 2278 ntBASIC18.27■□□□□ 0.52
SOX1O00570 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX1O00570 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SOX1O00570 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX1O00570 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX1O00570 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.27■□□□□ 0.52
SOX1O00570 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SOX1O00570 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.27■□□□□ 0.52
SOX1O00570 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.27■□□□□ 0.52
SOX1O00570 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SOX1O00570 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX1O00570 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SOX1O00570 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
SOX1O00570 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.27■□□□□ 0.51
SOX1O00570 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX1O00570 AL023806.1-201ENST00000603994 1649 ntBASIC18.27■□□□□ 0.51
SOX1O00570 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX1O00570 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
SOX1O00570 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SOX1O00570 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SOX1O00570 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SOX1O00570 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SOX1O00570 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SOX1O00570 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.26■□□□□ 0.51
SOX1O00570 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SOX1O00570 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SOX1O00570 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SOX1O00570 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.26■□□□□ 0.51
SOX1O00570 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.26■□□□□ 0.51
SOX1O00570 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms