Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.17■■□□□ 1.14
CHL1O00533 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHL1O00533 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHL1O00533 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CHL1O00533 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CHL1O00533 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHL1O00533 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHL1O00533 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC22.17■■□□□ 1.14
CHL1O00533 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHL1O00533 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHL1O00533 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHL1O00533 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
CHL1O00533 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 FRMD8P1-201ENST00000440433 1524 ntBASIC22.16■■□□□ 1.14
CHL1O00533 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.16■■□□□ 1.14
CHL1O00533 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CHL1O00533 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CHL1O00533 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
CHL1O00533 RHBDF1P1-201ENST00000427504 1941 ntBASIC22.16■■□□□ 1.14
CHL1O00533 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.16■■□□□ 1.14
CHL1O00533 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.16■■□□□ 1.14
CHL1O00533 AC004832.2-201ENST00000426397 482 ntBASIC22.16■■□□□ 1.14
CHL1O00533 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.16■■□□□ 1.14
CHL1O00533 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.16■■□□□ 1.14
CHL1O00533 AQP6-205ENST00000618286 829 ntTSL 5 BASIC22.16■■□□□ 1.14
CHL1O00533 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC22.16■■□□□ 1.14
CHL1O00533 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHL1O00533 CYP51A1P2-201ENST00000419457 1499 ntBASIC22.15■■□□□ 1.14
CHL1O00533 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CHL1O00533 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CHL1O00533 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.15■■□□□ 1.14
CHL1O00533 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CHL1O00533 PCDHB18P-201ENST00000524813 2368 ntBASIC22.15■■□□□ 1.14
CHL1O00533 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CHL1O00533 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.15■■□□□ 1.14
CHL1O00533 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.15■■□□□ 1.14
CHL1O00533 CXCL1P1-201ENST00000502804 216 ntBASIC22.15■■□□□ 1.14
CHL1O00533 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.15■■□□□ 1.14
CHL1O00533 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CHL1O00533 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.15■■□□□ 1.14
CHL1O00533 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC22.15■■□□□ 1.14
CHL1O00533 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
CHL1O00533 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.15■■□□□ 1.14
CHL1O00533 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHL1O00533 AC139713.2-201ENST00000641328 2723 ntBASIC22.15■■□□□ 1.14
CHL1O00533 LINC02012-201ENST00000608206 1725 ntBASIC22.14■■□□□ 1.14
CHL1O00533 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHL1O00533 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC22.14■■□□□ 1.13
CHL1O00533 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.14■■□□□ 1.13
CHL1O00533 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.14■■□□□ 1.13
CHL1O00533 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
CHL1O00533 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.14■■□□□ 1.13
CHL1O00533 AL513190.1-201ENST00000621254 727 ntBASIC22.14■■□□□ 1.13
CHL1O00533 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CHL1O00533 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHL1O00533 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CHL1O00533 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHL1O00533 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC22.13■■□□□ 1.13
CHL1O00533 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHL1O00533 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHL1O00533 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CHL1O00533 AC129492.6-201ENST00000611383 1305 ntBASIC22.13■■□□□ 1.13
CHL1O00533 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms