Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLDN5O00501 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 RPS15P9-201ENST00000494093 319 ntBASIC18.29■□□□□ 0.52
CLDN5O00501 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN5O00501 AC034105.1-201ENST00000563488 319 ntBASIC18.29■□□□□ 0.52
CLDN5O00501 AC145285.3-201ENST00000564603 959 ntBASIC18.29■□□□□ 0.52
CLDN5O00501 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.29■□□□□ 0.52
CLDN5O00501 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN5O00501 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CLDN5O00501 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.29■□□□□ 0.52
CLDN5O00501 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CLDN5O00501 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLDN5O00501 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 AL138688.1-201ENST00000624851 1594 ntBASIC18.29■□□□□ 0.52
CLDN5O00501 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLDN5O00501 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CLDN5O00501 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN5O00501 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLDN5O00501 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN5O00501 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.28■□□□□ 0.52
CLDN5O00501 MIR574-201ENST00000385209 96 ntBASIC18.28■□□□□ 0.52
CLDN5O00501 AC009947.1-201ENST00000444350 727 ntBASIC18.28■□□□□ 0.52
CLDN5O00501 Z83851.2-201ENST00000609564 659 ntBASIC18.28■□□□□ 0.52
CLDN5O00501 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN5O00501 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLDN5O00501 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 CROCCP2-202ENST00000412962 2773 ntBASIC18.28■□□□□ 0.52
CLDN5O00501 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN5O00501 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CLDN5O00501 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN5O00501 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
CLDN5O00501 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN5O00501 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN5O00501 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLDN5O00501 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
CLDN5O00501 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN5O00501 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN5O00501 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLDN5O00501 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CLDN5O00501 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN5O00501 MIR940-201ENST00000401276 94 ntBASIC18.27■□□□□ 0.52
CLDN5O00501 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN5O00501 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN5O00501 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN5O00501 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN5O00501 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN5O00501 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.27■□□□□ 0.51
CLDN5O00501 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.27■□□□□ 0.51
CLDN5O00501 GPR89P-201ENST00000407924 1495 ntBASIC18.26■□□□□ 0.51
CLDN5O00501 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN5O00501 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN5O00501 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLDN5O00501 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN5O00501 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN5O00501 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN5O00501 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN5O00501 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLDN5O00501 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN5O00501 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.26■□□□□ 0.51
CLDN5O00501 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN5O00501 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms