Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.73■□□□□ 0.27
SLC28A1O00337 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC28A1O00337 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A1O00337 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SLC28A1O00337 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A1O00337 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A1O00337 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A1O00337 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A1O00337 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC28A1O00337 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A1O00337 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC28A1O00337 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC28A1O00337 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SLC28A1O00337 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
SLC28A1O00337 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
SLC28A1O00337 AC246785.2-201ENST00000432512 513 ntBASIC16.72■□□□□ 0.27
SLC28A1O00337 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC28A1O00337 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC28A1O00337 AC009533.2-201ENST00000543664 586 ntBASIC16.72■□□□□ 0.27
SLC28A1O00337 AC124947.2-201ENST00000547118 1133 ntBASIC16.72■□□□□ 0.27
SLC28A1O00337 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.72■□□□□ 0.27
SLC28A1O00337 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC28A1O00337 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SLC28A1O00337 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
SLC28A1O00337 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC28A1O00337 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC28A1O00337 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC28A1O00337 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC28A1O00337 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 AC105020.1-201ENST00000435356 2205 ntBASIC16.72■□□□□ 0.27
SLC28A1O00337 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC28A1O00337 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
SLC28A1O00337 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
SLC28A1O00337 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 AC092053.1-201ENST00000605787 1936 ntBASIC16.71■□□□□ 0.27
SLC28A1O00337 AC005915.1-201ENST00000624912 2018 ntBASIC16.71■□□□□ 0.27
SLC28A1O00337 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC28A1O00337 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SLC28A1O00337 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC28A1O00337 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC28A1O00337 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC28A1O00337 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SLC28A1O00337 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC28A1O00337 VENTXP7-201ENST00000475503 772 ntBASIC16.71■□□□□ 0.27
SLC28A1O00337 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC28A1O00337 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 RN7SL850P-201ENST00000579959 291 ntBASIC16.71■□□□□ 0.27
SLC28A1O00337 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC28A1O00337 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC28A1O00337 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC28A1O00337 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC28A1O00337 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC28A1O00337 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC28A1O00337 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC28A1O00337 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC28A1O00337 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 AGGF1P2-201ENST00000426656 2106 ntBASIC16.7■□□□□ 0.26
SLC28A1O00337 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC28A1O00337 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC28A1O00337 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC28A1O00337 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms