Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.47■□□□□ 0.23
UPK1AO00322 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
UPK1AO00322 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.47■□□□□ 0.23
UPK1AO00322 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.47■□□□□ 0.23
UPK1AO00322 VENTXP7-201ENST00000475503 772 ntBASIC16.47■□□□□ 0.23
UPK1AO00322 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.47■□□□□ 0.23
UPK1AO00322 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.47■□□□□ 0.23
UPK1AO00322 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.47■□□□□ 0.23
UPK1AO00322 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
UPK1AO00322 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 AC233702.3-201ENST00000578656 1387 ntBASIC16.47■□□□□ 0.23
UPK1AO00322 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.47■□□□□ 0.23
UPK1AO00322 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
UPK1AO00322 AL603756.1-201ENST00000606511 2163 ntBASIC16.47■□□□□ 0.23
UPK1AO00322 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
UPK1AO00322 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UPK1AO00322 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
UPK1AO00322 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK1AO00322 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
UPK1AO00322 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK1AO00322 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1AO00322 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
UPK1AO00322 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.46■□□□□ 0.23
UPK1AO00322 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1AO00322 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.46■□□□□ 0.23
UPK1AO00322 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1AO00322 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
UPK1AO00322 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.46■□□□□ 0.23
UPK1AO00322 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.46■□□□□ 0.23
UPK1AO00322 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.46■□□□□ 0.23
UPK1AO00322 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UPK1AO00322 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UPK1AO00322 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
UPK1AO00322 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.46■□□□□ 0.22
UPK1AO00322 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UPK1AO00322 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.46■□□□□ 0.22
UPK1AO00322 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UPK1AO00322 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.45■□□□□ 0.22
UPK1AO00322 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.45■□□□□ 0.22
UPK1AO00322 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UPK1AO00322 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
UPK1AO00322 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
UPK1AO00322 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 LYSMD4-203ENST00000378904 2122 ntBASIC16.45■□□□□ 0.22
UPK1AO00322 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UPK1AO00322 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UPK1AO00322 TOB2P1-201ENST00000469761 992 ntBASIC16.45■□□□□ 0.22
UPK1AO00322 AC002558.1-201ENST00000488906 803 ntBASIC16.45■□□□□ 0.22
UPK1AO00322 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
UPK1AO00322 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms