Protein–RNA interactions for Protein: O00291

HIP1, Huntingtin-interacting protein 1, humanhuman

Predictions only

Length 1,037 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1O00291 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HIP1O00291 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HIP1O00291 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.9■□□□□ 0.94
HIP1O00291 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HIP1O00291 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.9■□□□□ 0.94
HIP1O00291 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.9■□□□□ 0.94
HIP1O00291 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.9■□□□□ 0.94
HIP1O00291 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.9■□□□□ 0.94
HIP1O00291 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.9■□□□□ 0.94
HIP1O00291 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.9■□□□□ 0.94
HIP1O00291 MTDHP3-201ENST00000594186 672 ntBASIC20.9■□□□□ 0.94
HIP1O00291 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.9■□□□□ 0.94
HIP1O00291 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.9■□□□□ 0.94
HIP1O00291 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HIP1O00291 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.9■□□□□ 0.94
HIP1O00291 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HIP1O00291 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
HIP1O00291 AL121761.2-201ENST00000598007 1648 ntBASIC20.89■□□□□ 0.94
HIP1O00291 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HIP1O00291 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.89■□□□□ 0.94
HIP1O00291 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HIP1O00291 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HIP1O00291 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
HIP1O00291 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HIP1O00291 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.89■□□□□ 0.93
HIP1O00291 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
HIP1O00291 AC124947.2-201ENST00000547118 1133 ntBASIC20.89■□□□□ 0.93
HIP1O00291 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.89■□□□□ 0.93
HIP1O00291 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.89■□□□□ 0.93
HIP1O00291 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.89■□□□□ 0.93
HIP1O00291 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 AL022326.1-202ENST00000641533 845 ntBASIC20.89■□□□□ 0.93
HIP1O00291 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HIP1O00291 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
HIP1O00291 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HIP1O00291 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HIP1O00291 AC097637.2-201ENST00000624096 1997 ntBASIC20.88■□□□□ 0.93
HIP1O00291 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.88■□□□□ 0.93
HIP1O00291 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.88■□□□□ 0.93
HIP1O00291 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.88■□□□□ 0.93
HIP1O00291 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 SAPCD2P3-201ENST00000455031 850 ntBASIC20.88■□□□□ 0.93
HIP1O00291 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 AC008608.2-201ENST00000606089 416 ntBASIC20.88■□□□□ 0.93
HIP1O00291 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HIP1O00291 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.88■□□□□ 0.93
HIP1O00291 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
HIP1O00291 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.87■□□□□ 0.93
HIP1O00291 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HIP1O00291 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.87■□□□□ 0.93
HIP1O00291 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.87■□□□□ 0.93
HIP1O00291 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.87■□□□□ 0.93
HIP1O00291 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HIP1O00291 NKAPP1-205ENST00000585790 367 ntBASIC20.87■□□□□ 0.93
HIP1O00291 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HIP1O00291 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms