Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PDLIM1O00151 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PDLIM1O00151 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.58■□□□□ 0.24
PDLIM1O00151 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PDLIM1O00151 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDLIM1O00151 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PDLIM1O00151 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PDLIM1O00151 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM1O00151 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.57■□□□□ 0.24
PDLIM1O00151 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM1O00151 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM1O00151 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM1O00151 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PDLIM1O00151 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.57■□□□□ 0.24
PDLIM1O00151 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PDLIM1O00151 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.57■□□□□ 0.24
PDLIM1O00151 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PDLIM1O00151 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDLIM1O00151 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PDLIM1O00151 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.56■□□□□ 0.24
PDLIM1O00151 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.56■□□□□ 0.24
PDLIM1O00151 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.56■□□□□ 0.24
PDLIM1O00151 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
PDLIM1O00151 AL512604.3-201ENST00000569583 964 ntBASIC16.56■□□□□ 0.24
PDLIM1O00151 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms