Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.68■□□□□ 0.26
TRABD2BA6NFA1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 AC148477.5-201ENST00000625164 1645 ntBASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 SIRPAP1-201ENST00000448467 1770 ntBASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 GK-202ENST00000378941 458 ntTSL 3 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 COX5BP2-201ENST00000392354 334 ntBASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 AC093520.2-201ENST00000561830 333 ntBASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 AL805961.1-202ENST00000641562 540 ntBASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRABD2BA6NFA1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 AC132938.5-201ENST00000624980 1813 ntBASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 AC023141.5-201ENST00000458585 616 ntBASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 AL353593.2-201ENST00000602529 1483 ntBASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRABD2BA6NFA1 AC132938.6-201ENST00000623828 1655 ntBASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRABD2BA6NFA1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms