Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 AC078925.2-201ENST00000624013 1973 ntBASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 PAUPAR-201ENST00000630360 2965 ntBASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MEIS3P1A6NDR6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AL135905.2-201ENST00000584934 1404 ntBASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AC006449.5-201ENST00000610658 2098 ntBASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.93□□□□□ -0.02
MEIS3P1A6NDR6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 SLC25A1P2-201ENST00000430693 912 ntBASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 MIR4651-201ENST00000582622 73 ntBASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 AC026691.1-201ENST00000602502 2017 ntBASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.92□□□□□ -0.02
MEIS3P1A6NDR6 LINC01311-201ENST00000565162 1445 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms