Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 PHGDH-209ENST00000641074 1780 ntBASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 HLA-J-201ENST00000462773 1622 ntBASIC16.78■□□□□ 0.28
PCDHGA6Q9Y5G7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 FAM220CP-201ENST00000395253 831 ntBASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 TERC-201ENST00000602385 541 ntBASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA6Q9Y5G7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGA6Q9Y5G7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGA6Q9Y5G7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA6Q9Y5G7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDHGA6Q9Y5G7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA6Q9Y5G7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 RPS2P1-201ENST00000434010 821 ntBASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 POLD2P1-201ENST00000511220 997 ntBASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 OR7E14P-202ENST00000530490 1290 ntBASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 AP000867.4-201ENST00000641616 219 ntBASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 HTR7P1-202ENST00000624664 4411 ntBASIC16.76■□□□□ 0.27
PCDHGA6Q9Y5G7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 AC022211.2-201ENST00000585075 2527 ntBASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGA6Q9Y5G7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms