Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HHLA3Q9XRX5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 AC092850.2-201ENST00000623821 2697 ntBASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 HLA-F-220ENST00000434407 884 ntBASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 AC092597.1-201ENST00000487352 616 ntBASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 LINC01311-201ENST00000565162 1445 ntBASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HHLA3Q9XRX5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms