Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RN7SL692P-201ENST00000464677 288 ntBASIC16.46■□□□□ 0.23
LHX6Q9UPM6 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AC096734.2-201ENST00000562054 433 ntBASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AL596325.1-201ENST00000563991 1082 ntBASIC16.46■□□□□ 0.23
LHX6Q9UPM6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 REXO1L3P-201ENST00000622202 1288 ntBASIC16.46■□□□□ 0.23
LHX6Q9UPM6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
LHX6Q9UPM6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LHX6Q9UPM6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LHX6Q9UPM6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
LHX6Q9UPM6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 AL161938.1-201ENST00000569833 2180 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 AC025580.3-201ENST00000617932 1424 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 AC093503.3-201ENST00000624917 2352 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 COX5BP8-201ENST00000416911 349 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 DDX43P3-201ENST00000441064 443 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 GPR53P-205ENST00000457298 1084 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 IGHV3-65-201ENST00000523210 341 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 AC022960.2-201ENST00000616300 666 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 MYLKP1-201ENST00000509077 1580 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 AC006504.4-201ENST00000592118 1568 ntBASIC16.45■□□□□ 0.22
LHX6Q9UPM6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.45■□□□□ 0.22
LHX6Q9UPM6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 AC008667.4-201ENST00000607370 168 ntBASIC16.44■□□□□ 0.22
LHX6Q9UPM6 AC004706.3-202ENST00000621574 984 ntBASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 AC009093.7-201ENST00000623853 1223 ntBASIC16.44■□□□□ 0.22
LHX6Q9UPM6 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 AL121761.2-201ENST00000598007 1648 ntBASIC16.44■□□□□ 0.22
LHX6Q9UPM6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.44■□□□□ 0.22
LHX6Q9UPM6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LHX6Q9UPM6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms