Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRDM9Q9NQV7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 FAM197Y8-203ENST00000450145 560 ntBASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 AC073648.2-201ENST00000510116 352 ntBASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 AC132872.1-201ENST00000566986 1195 ntBASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 NKAPP1-205ENST00000585790 367 ntBASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 TP73-AS1-207ENST00000624167 988 ntBASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 PKD1P1-201ENST00000458669 6805 ntBASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRDM9Q9NQV7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 AC026396.1-201ENST00000419388 421 ntBASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 AF186996.4-201ENST00000467186 377 ntBASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 SART3-203ENST00000546611 1184 ntBASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRDM9Q9NQV7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 CROCCP2-202ENST00000412962 2773 ntBASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRDM9Q9NQV7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms