Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 AC111152.3-201ENST00000569699 673 ntBASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 AC005336.2-201ENST00000593183 939 ntBASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRTM1Q9HBL6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 FAM220CP-201ENST00000395253 831 ntBASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 AC103564.2-201ENST00000432853 1299 ntBASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 KRT8P26-201ENST00000534154 1276 ntBASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 AL136038.3-201ENST00000561909 1096 ntBASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 AL590326.2-201ENST00000625139 305 ntBASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 AL049757.1-201ENST00000616842 1596 ntBASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRTM1Q9HBL6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRTM1Q9HBL6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.71■□□□□ 0.26
LRTM1Q9HBL6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRTM1Q9HBL6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRTM1Q9HBL6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
LRTM1Q9HBL6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms