Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ATP13A3Q9H7F0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 FDX1P1-201ENST00000449115 551 ntBASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 OR7E14P-202ENST00000530490 1290 ntBASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ATP13A3Q9H7F0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 AC099398.1-201ENST00000567919 2776 ntBASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 LAGE3P1-201ENST00000425356 484 ntBASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 RPS2P1-201ENST00000434010 821 ntBASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 AP001005.1-201ENST00000571755 1248 ntBASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 AL589182.2-201ENST00000619332 1049 ntBASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 AC148477.8-201ENST00000624298 468 ntBASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP13A3Q9H7F0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 NCF1C-201ENST00000438382 1427 ntBASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 AL031284.1-201ENST00000419297 478 ntBASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 AC093909.1-201ENST00000504731 1122 ntBASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 AC139887.3-201ENST00000568585 713 ntBASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 AC107918.4-202ENST00000641623 219 ntBASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ATP13A3Q9H7F0 AL138688.1-201ENST00000624851 1594 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms