Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 BX005266.1-201ENST00000473402 457 ntBASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 AL645608.8-201ENST00000606034 2086 ntBASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
POLR1EQ9GZS1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 AC116353.5-201ENST00000638148 1699 ntBASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 AC004870.1-201ENST00000315132 882 ntBASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 RN7SL510P-201ENST00000581311 263 ntBASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 AC004817.3-201ENST00000602957 2129 ntBASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR1EQ9GZS1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 SART3-203ENST00000546611 1184 ntBASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR1EQ9GZS1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR1EQ9GZS1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
POLR1EQ9GZS1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR1EQ9GZS1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
POLR1EQ9GZS1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
POLR1EQ9GZS1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
POLR1EQ9GZS1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms