Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC10.41□□□□□ -0.74
LIMD2Q9BT23 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC10.4□□□□□ -0.74
LIMD2Q9BT23 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 GCSHP2-201ENST00000560971 527 ntBASIC10.4□□□□□ -0.74
LIMD2Q9BT23 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 AL138966.2-201ENST00000621997 464 ntBASIC10.4□□□□□ -0.74
LIMD2Q9BT23 AL023973.1-201ENST00000624619 620 ntBASIC10.4□□□□□ -0.74
LIMD2Q9BT23 ANKRD20A8P-203ENST00000641373 517 ntBASIC10.4□□□□□ -0.74
LIMD2Q9BT23 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC10.4□□□□□ -0.74
LIMD2Q9BT23 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
LIMD2Q9BT23 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LIMD2Q9BT23 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC10.4□□□□□ -0.75
LIMD2Q9BT23 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LIMD2Q9BT23 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
LIMD2Q9BT23 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
LIMD2Q9BT23 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
LIMD2Q9BT23 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 AL136379.1-201ENST00000623471 2642 ntBASIC10.39□□□□□ -0.75
LIMD2Q9BT23 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 HLA-DQB1-201ENST00000374943 1656 ntBASIC10.39□□□□□ -0.75
LIMD2Q9BT23 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms