Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 KRT17P6-201ENST00000453795 1220 ntBASIC16.51■□□□□ 0.23
BBS4Q96RK4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 AC019129.2-201ENST00000609837 1235 ntBASIC16.51■□□□□ 0.23
BBS4Q96RK4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BBS4Q96RK4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BBS4Q96RK4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 AP000867.3-201ENST00000524675 377 ntBASIC16.5■□□□□ 0.23
BBS4Q96RK4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 AC074051.2-201ENST00000565115 352 ntBASIC16.5■□□□□ 0.23
BBS4Q96RK4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
BBS4Q96RK4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
BBS4Q96RK4 NSUN5P1-202ENST00000421140 1535 ntBASIC16.5■□□□□ 0.23
BBS4Q96RK4 NSUN5P2-203ENST00000457352 1529 ntBASIC16.5■□□□□ 0.23
BBS4Q96RK4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 TP73-AS1-210ENST00000637775 1455 ntBASIC16.49■□□□□ 0.23
BBS4Q96RK4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 AC104819.1-201ENST00000504587 486 ntBASIC16.49■□□□□ 0.23
BBS4Q96RK4 AC096582.2-201ENST00000510860 516 ntBASIC16.49■□□□□ 0.23
BBS4Q96RK4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.49■□□□□ 0.23
BBS4Q96RK4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BBS4Q96RK4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
BBS4Q96RK4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
BBS4Q96RK4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
BBS4Q96RK4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms