Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 MIR3180-5-201ENST00000583743 153 ntBASIC13.2□□□□□ -0.3
AP1S3Q96PC3 MIR6786-201ENST00000616843 113 ntBASIC13.2□□□□□ -0.3
AP1S3Q96PC3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
AP1S3Q96PC3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 AL163051.1-201ENST00000569214 1512 ntBASIC13.19□□□□□ -0.3
AP1S3Q96PC3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 GPAT2P1-201ENST00000444924 1672 ntBASIC13.19□□□□□ -0.3
AP1S3Q96PC3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AP1S3Q96PC3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 AC108860.2-201ENST00000562760 2183 ntBASIC13.18□□□□□ -0.3
AP1S3Q96PC3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
AP1S3Q96PC3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms