Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC122714.2-201ENST00000502787 707 ntBASIC20.31■□□□□ 0.84
TRIM47Q96LD4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 AC138028.4-201ENST00000564984 1845 ntBASIC20.31■□□□□ 0.84
TRIM47Q96LD4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM47Q96LD4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM47Q96LD4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 AC096633.1-201ENST00000422446 749 ntBASIC20.29■□□□□ 0.84
TRIM47Q96LD4 PRSS29P-201ENST00000440800 595 ntBASIC20.29■□□□□ 0.84
TRIM47Q96LD4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM47Q96LD4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AL139400.1-201ENST00000366220 510 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms