Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD4Q96DM1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD4Q96DM1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD4Q96DM1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD4Q96DM1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD4Q96DM1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PGBD4Q96DM1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 MCCD1P2-201ENST00000423228 335 ntBASIC18.81■□□□□ 0.6
PGBD4Q96DM1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 AC046185.3-201ENST00000623228 1824 ntBASIC18.81■□□□□ 0.6
PGBD4Q96DM1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PGBD4Q96DM1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 AL133373.2-201ENST00000623187 2828 ntBASIC18.8■□□□□ 0.6
PGBD4Q96DM1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.8■□□□□ 0.6
PGBD4Q96DM1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 AC092183.1-201ENST00000469884 875 ntBASIC18.8■□□□□ 0.6
PGBD4Q96DM1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PGBD4Q96DM1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PGBD4Q96DM1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 REXO1L11P-201ENST00000620964 1927 ntBASIC18.78■□□□□ 0.6
PGBD4Q96DM1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PGBD4Q96DM1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms